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Longitudinal multiorgan transcriptomic atlas of salt-induced hypertension
Ratnakar Tiwari, Olha Kravtsova, Lashodya V. Dissanayake, Melissa Lowe, Biyang Xu, Vladislav Levchenko, Steven Didik, Ruslan Bohovyk, Daria V. Ilatovskaya, Oleg Palygin, Alexander Staruschenko
Ratnakar Tiwari, Olha Kravtsova, Lashodya V. Dissanayake, Melissa Lowe, Biyang Xu, Vladislav Levchenko, Steven Didik, Ruslan Bohovyk, Daria V. Ilatovskaya, Oleg Palygin, Alexander Staruschenko
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Research Article Inflammation Metabolism Nephrology

Longitudinal multiorgan transcriptomic atlas of salt-induced hypertension

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Abstract

High dietary salt intake elevates blood pressure and drives multiorgan damage. However, the molecular programs underlying progressive organ injury remain poorly defined. Here, we present a longitudinal multiorgan transcriptomic atlas of salt-induced hypertensive injury. We profiled kidney cortex, kidney medulla, heart, and liver across 4 stages, spanning early hypertension to advanced pathology in Dahl salt-sensitive rats. We identified dynamic and tissue-specific molecular trajectories, including a shared early proliferative response that converges on proinflammatory and fibrotic remodeling. Notably, we uncovered compartment-specific renal responses, showing that the cortex and medulla, despite their proximity, follow distinct molecular trajectories during disease progression. We further identified 79 stage- and tissue-specific transcription factors that drive gene expression dynamics in salt-induced hypertensive injury. Integration with human genome-wide association studies revealed conserved pathways in endocrine signaling, ion transport, lipid metabolism, and detoxification, establishing cross-species relevance and highlighting mechanistic targets of clinical importance. Compound-transcriptome analysis revealed stage- and organ-specific therapeutic opportunities, prioritizing kinase and epigenetic modulators as candidates to rebalance maladaptive gene programs. Overall, this study provides a resource for understanding molecular mechanisms from early salt-induced hypertension to tissue-specific injury and underscores the need for precision interventions.

Authors

Ratnakar Tiwari, Olha Kravtsova, Lashodya V. Dissanayake, Melissa Lowe, Biyang Xu, Vladislav Levchenko, Steven Didik, Ruslan Bohovyk, Daria V. Ilatovskaya, Oleg Palygin, Alexander Staruschenko

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Figure 6

Temporal and organ-specific prediction of small-molecule modulators to target salt-induced hypertensive gene signatures.

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Temporal and organ-specific prediction of small-molecule modulators to t...
(A–D) Sankey diagrams integrating differential expression profiles with LINCS L1000 chemical perturbation signatures for significantly upregulated genes in the kidney cortex (A), kidney medulla (B), liver (C), and heart (D). Each network connects time points (days 7–35; left), enriched top 5 Hallmark pathways (middle), and the top predicted small molecules (right) prioritized for their potential to reverse disease-associated transcriptional changes. Edge thickness denotes −log10(Padj value), indicating enrichment strength. (E) Stacked stream graphs show, for each tissue, the cumulative enrichment of small-molecule classes at each time point, represented as the summed –log10(Padj value) of all compounds within each class. Peaks indicate phases when a given class is most strongly aligned with the organ-specific transcriptome. CX, cortex; MD, medulla; LV, liver; HR, heart; D7, day 7; D14, day 14; D21, day 21; and D35, day 35 time points. Padj indicates Padj value. n = 6 male rats per group.

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