Go to The Journal of Clinical Investigation
  • About
  • Editors
  • Consulting Editors
  • For authors
  • Publication ethics
  • Publication alerts by email
  • Transfers
  • Advertising
  • Job board
  • Contact
  • Physician-Scientist Development
  • Current issue
  • Past issues
  • By specialty
    • COVID-19
    • Cardiology
    • Immunology
    • Metabolism
    • Nephrology
    • Oncology
    • Pulmonology
    • All ...
  • Videos
  • Collections
    • In-Press Preview
    • Resource and Technical Advances
    • Clinical Research and Public Health
    • Research Letters
    • Editorials
    • Perspectives
    • Physician-Scientist Development
    • Reviews
    • Top read articles

  • Current issue
  • Past issues
  • Specialties
  • In-Press Preview
  • Resource and Technical Advances
  • Clinical Research and Public Health
  • Research Letters
  • Editorials
  • Perspectives
  • Physician-Scientist Development
  • Reviews
  • Top read articles
  • About
  • Editors
  • Consulting Editors
  • For authors
  • Publication ethics
  • Publication alerts by email
  • Transfers
  • Advertising
  • Job board
  • Contact
A platform for parallel TCR cloning and testing enables anti-neoantigen tumor immunotherapy
Alexander M. Rowe, Smriti Chaurasia, Wenzhong Wei, Laura García-Diéguez, Katherine Tempro, Johnathon G. Schiebel, Christy Smolak, Alexander Muralles, Daniel Wikenheiser, Kevin Quann, Collin Pirner, Kentin Codispot, Mark J. Shlomchik, Warren D. Shlomchik
Alexander M. Rowe, Smriti Chaurasia, Wenzhong Wei, Laura García-Diéguez, Katherine Tempro, Johnathon G. Schiebel, Christy Smolak, Alexander Muralles, Daniel Wikenheiser, Kevin Quann, Collin Pirner, Kentin Codispot, Mark J. Shlomchik, Warren D. Shlomchik
View: Text | PDF
Research Article Immunology Oncology

A platform for parallel TCR cloning and testing enables anti-neoantigen tumor immunotherapy

  • Text
  • PDF
Abstract

Tumor-infiltrating CD8 cells recognize neoantigens created by tumor-specific mutations. Nonetheless, even after checkpoint inhibitor therapy, most patients’ tumors progress. A deeper understanding of antitumor responses could facilitate development of better therapies. To enable such studies, we applied TCXpress, a high throughput platform that clones fully expressible TCRs from single cells into retroviral or lentiviral vectors without sequencing or gene synthesis, to study TCRs from CD8 cells infiltrating mouse MC38 tumors. We expressed cloned TCRs in reporter cells and interrogated TCR specificity by coculturing them with B6WT3 cells transduced with tandem minigenes encoding predicted neoantigens. We isolated TCRs reactive against epitopes from mutant Rpl18, Adpgk, Psmd2, and Zc3h7b along with self-reactive TCRs that recognized normal B6 and MC38 cells. Importantly, we successfully treated MC38-bearing mice with T cells transduced with anti-Rpl18 TCRs. These results establish a system that could be used to study many types of T cell responses and validate a therapeutic approach that could be tested in the clinic.

Authors

Alexander M. Rowe, Smriti Chaurasia, Wenzhong Wei, Laura García-Diéguez, Katherine Tempro, Johnathon G. Schiebel, Christy Smolak, Alexander Muralles, Daniel Wikenheiser, Kevin Quann, Collin Pirner, Kentin Codispot, Mark J. Shlomchik, Warren D. Shlomchik

×

Figure 3

Development of TCX 1.0 and TCX 2.0 T cell products.

Options: View larger image (or click on image) Download as PowerPoint
Development of TCX 1.0 and TCX 2.0 T cell products.
(A) Schematic for TC...
(A) Schematic for TCX 1.0 production. Purified splenic T cells were activated with anti-CD3/CD28 Dynabeads and IL-2 for 2 days. De-beaded cells underwent TCRα/TCRβ chain deletion via electroporation of gRNA/Cas9 complexes. After resting for 1 hour, these cells were transduced with OT-1 TCR-encoding retrovirus (coexpresses GFP) and cultured for 6 additional days in IL-2. (B and C) Characteristics of cells manufactured as in A, with or without CRISPR-TCR deletion or retroviral transduction. (B) Staining for TCRβ and CD8 (gated on CD90.1+ cells). (C) GFP or dexOVA staining versus TCRβ expression (gated on CD90.1+CD8+ cells). (D and E) KO of the endogenous TCR dramatically improved dexOVA binding on OT-1 TCR-transduced CD8 cells. The resultant improvement in OT-1 TCR expression translated into better in vitro killing of B16-TMG cells. (F) Schematic representation of differences between TCX 1.0 and TCX 2.0 production. (G and H) T cell activation in TCX 1.0 is with anti-CD3/CD28 beads and IL-2, whereas in TCX 2.0, activation is with plate bound ant-CD3, IL-2, and soluble antibodies against CD28 and 41BB (gated on CD8+ cells); a higher percentage of TCX 2.0 CD8 cells were IL-7R+ and IL-7R+TCF-1+. (I–K) TCX 2.0 led to better dexOVA binding (I and J) and more viral integrations per cell (K). For G–K, each symbol represents data from a unique T cell product; data were compared using Mann-Whitney rank-sum tests.

Copyright © 2026 American Society for Clinical Investigation
ISSN 2379-3708

Sign up for email alerts