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PBMC transcriptomic signatures reflect Trypanosoma cruzi strain diversity and trained immunity in chronically infected macaques
Hans Desale, Weihong Tu, Kelly Goff, Preston A. Marx, Claudia Herrera, Eric Dumonteil
Hans Desale, Weihong Tu, Kelly Goff, Preston A. Marx, Claudia Herrera, Eric Dumonteil
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Research Article Infectious disease Microbiology

PBMC transcriptomic signatures reflect Trypanosoma cruzi strain diversity and trained immunity in chronically infected macaques

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Abstract

Chagas disease is a tropical disease caused by Trypanosoma cruzi with clinical presentations ranging from asymptomatic to cardiac and/or gastrointestinal complications. The mechanisms of pathogenesis are still poorly understood, but T. cruzi strain diversity may be associated with disease progression. Therefore, we evaluated the transcriptomic response of PBMCs from macaques with natural chronic infections and tested for heterogeneity in their gene signatures. Remarkably, transcriptomic response to T. cruzi infection matched parasite strain profiles, indicating that parasite diversity is a key determinant of host response. While differences in adaptive immune responses were identified, more striking alterations of innate immune processes were detected. Thus, initial innate response to T. cruzi infection may be conditioned by parasite strain diversity, resulting in different profiles of trained immunity modulating subsequent adaptive responses, allowing parasite control or its persistence during the chronic phase. These results call for further characterization of the cross-talk between innate and adaptive immunity according to parasite diversity as well as how altered trained immunity contributes to pathogenesis, as this may lead to better treatments and vaccines.

Authors

Hans Desale, Weihong Tu, Kelly Goff, Preston A. Marx, Claudia Herrera, Eric Dumonteil

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Figure 3

Multivariate analysis of PBMC gene expression between T. cruzi–infected and uninfected macaques.

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Multivariate analysis of PBMC gene expression between T. cruzi–infected ...
(A) BGA of infected and uninfected macaques, indicating clustering of individual macaques. Infected macaques are indicated in blue, and uninfected are indicated in red. (B) Overlay of macaque clustering and gene clustering from BGA. Colored dots and lines represent individual macaques; infected are indicated in blue, and uninfected are indicated in red. Black dots and boxed gene names represent individual genes, with genes found at the ends of the main BGA discrimination axis representing genes most associated with macaque groups. (C) Top 20 genes which expression profile is most associated with each macaque group. Genes in the top part of the graph are upregulated, while those at the bottom are downregulated in infected macaques versus uninfected macaques. A significant difference in gene expression level was detected by DESeq2 analysis for the genes labeled in green. Statistical test used was Wald test as implemented in DESeq2.

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